Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.25■□□□□ 0.67
Ripk1Q60855 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ripk1Q60855 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.25■□□□□ 0.67
Ripk1Q60855 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ripk1Q60855 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ripk1Q60855 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ripk1Q60855 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.24■□□□□ 0.67
Ripk1Q60855 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ripk1Q60855 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ripk1Q60855 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.24■□□□□ 0.67
Ripk1Q60855 Gm5812-201ENSMUST00000061073 957 ntBASIC19.24■□□□□ 0.67
Ripk1Q60855 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ripk1Q60855 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ripk1Q60855 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ripk1Q60855 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ripk1Q60855 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ripk1Q60855 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.23■□□□□ 0.67
Ripk1Q60855 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ripk1Q60855 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ripk1Q60855 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ripk1Q60855 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ripk1Q60855 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.22■□□□□ 0.67
Ripk1Q60855 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ripk1Q60855 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ripk1Q60855 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Ripk1Q60855 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ripk1Q60855 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Ripk1Q60855 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ripk1Q60855 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ripk1Q60855 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ripk1Q60855 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ripk1Q60855 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ripk1Q60855 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.2■□□□□ 0.66
Ripk1Q60855 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Ripk1Q60855 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ripk1Q60855 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk1Q60855 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk1Q60855 Gm15820-201ENSMUST00000201566 728 ntBASIC19.19■□□□□ 0.66
Ripk1Q60855 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.19■□□□□ 0.66
Ripk1Q60855 Gm40881-201ENSMUST00000223397 166 ntBASIC19.19■□□□□ 0.66
Ripk1Q60855 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk1Q60855 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk1Q60855 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.19■□□□□ 0.66
Ripk1Q60855 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.19■□□□□ 0.66
Ripk1Q60855 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ripk1Q60855 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.18■□□□□ 0.66
Ripk1Q60855 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.18■□□□□ 0.66
Ripk1Q60855 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ripk1Q60855 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.18■□□□□ 0.66
Ripk1Q60855 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ripk1Q60855 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Ripk1Q60855 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk1Q60855 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk1Q60855 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.17■□□□□ 0.66
Ripk1Q60855 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.17■□□□□ 0.66
Ripk1Q60855 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ripk1Q60855 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk1Q60855 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk1Q60855 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk1Q60855 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.16■□□□□ 0.66
Ripk1Q60855 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.16■□□□□ 0.66
Ripk1Q60855 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.16■□□□□ 0.66
Ripk1Q60855 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk1Q60855 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Ripk1Q60855 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ripk1Q60855 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ripk1Q60855 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Gm15546-201ENSMUST00000122095 826 ntBASIC19.15■□□□□ 0.66
Ripk1Q60855 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ripk1Q60855 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ripk1Q60855 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk1Q60855 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk1Q60855 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ripk1Q60855 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk1Q60855 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk1Q60855 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.14■□□□□ 0.65
Ripk1Q60855 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ripk1Q60855 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms