Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
Ubr3Q5U430 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
Ubr3Q5U430 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Ubr3Q5U430 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Gm11421-201ENSMUST00000122124 294 ntBASIC25.48■■□□□ 1.67
Ubr3Q5U430 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Ubr3Q5U430 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr3Q5U430 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr3Q5U430 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr3Q5U430 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Ubr3Q5U430 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr3Q5U430 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr3Q5U430 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr3Q5U430 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Ubr3Q5U430 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC25.45■■□□□ 1.67
Ubr3Q5U430 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC25.45■■□□□ 1.67
Ubr3Q5U430 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ubr3Q5U430 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
Ubr3Q5U430 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr3Q5U430 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC25.45■■□□□ 1.66
Ubr3Q5U430 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr3Q5U430 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC25.44■■□□□ 1.66
Ubr3Q5U430 AC153890.1-201ENSMUST00000220021 2469 ntBASIC25.44■■□□□ 1.66
Ubr3Q5U430 Gm12933-201ENSMUST00000120203 872 ntBASIC25.44■■□□□ 1.66
Ubr3Q5U430 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr3Q5U430 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr3Q5U430 Gm27045-201ENSMUST00000182145 1402 ntBASIC25.44■■□□□ 1.66
Ubr3Q5U430 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Ubr3Q5U430 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC25.43■■□□□ 1.66
Ubr3Q5U430 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr3Q5U430 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC25.43■■□□□ 1.66
Ubr3Q5U430 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr3Q5U430 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Ubr3Q5U430 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC25.42■■□□□ 1.66
Ubr3Q5U430 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr3Q5U430 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Ubr3Q5U430 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC25.42■■□□□ 1.66
Ubr3Q5U430 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC25.41■■□□□ 1.66
Ubr3Q5U430 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ubr3Q5U430 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ubr3Q5U430 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ubr3Q5U430 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ubr3Q5U430 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Ubr3Q5U430 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Ubr3Q5U430 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Ubr3Q5U430 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr3Q5U430 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr3Q5U430 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr3Q5U430 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Ubr3Q5U430 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr3Q5U430 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Ubr3Q5U430 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Ubr3Q5U430 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms