Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav3-1Q5R1I8 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trav3-1Q5R1I8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Trav3-1Q5R1I8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Hsf1-204ENSMUST00000226872 2104 ntBASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav3-1Q5R1I8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav3-1Q5R1I8 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav3-1Q5R1I8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav3-1Q5R1I8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav3-1Q5R1I8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Trav3-1Q5R1I8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms