Protein–RNA interactions for Protein: Q5FWC9

Gm3558, Predicted gene 3558, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3558Q5FWC9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm3558Q5FWC9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3558Q5FWC9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3558Q5FWC9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3558Q5FWC9 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm3558Q5FWC9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Gm3558Q5FWC9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Gm3558Q5FWC9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Gm3558Q5FWC9 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Gm3558Q5FWC9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms