Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Urb1Q571H0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.84■□□□□ 0.61
Urb1Q571H0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Urb1Q571H0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.83■□□□□ 0.61
Urb1Q571H0 Gm7143-201ENSMUST00000222811 859 ntBASIC18.83■□□□□ 0.61
Urb1Q571H0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Urb1Q571H0 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Urb1Q571H0 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Urb1Q571H0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Urb1Q571H0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
Urb1Q571H0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Urb1Q571H0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Urb1Q571H0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.81■□□□□ 0.6
Urb1Q571H0 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.81■□□□□ 0.6
Urb1Q571H0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Urb1Q571H0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.81■□□□□ 0.6
Urb1Q571H0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Urb1Q571H0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Urb1Q571H0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.8■□□□□ 0.6
Urb1Q571H0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.8■□□□□ 0.6
Urb1Q571H0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC18.8■□□□□ 0.6
Urb1Q571H0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.8■□□□□ 0.6
Urb1Q571H0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Urb1Q571H0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.79■□□□□ 0.6
Urb1Q571H0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.79■□□□□ 0.6
Urb1Q571H0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Urb1Q571H0 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Urb1Q571H0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.78■□□□□ 0.6
Urb1Q571H0 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.78■□□□□ 0.6
Urb1Q571H0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Urb1Q571H0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Urb1Q571H0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Urb1Q571H0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.77■□□□□ 0.6
Urb1Q571H0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Urb1Q571H0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Urb1Q571H0 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Urb1Q571H0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.77■□□□□ 0.6
Urb1Q571H0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Urb1Q571H0 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Urb1Q571H0 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Urb1Q571H0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Urb1Q571H0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Urb1Q571H0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Urb1Q571H0 AV356131-201ENSMUST00000206201 750 ntBASIC18.76■□□□□ 0.59
Urb1Q571H0 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.76■□□□□ 0.59
Urb1Q571H0 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.76■□□□□ 0.59
Urb1Q571H0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Urb1Q571H0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Urb1Q571H0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Urb1Q571H0 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Urb1Q571H0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Urb1Q571H0 Smad6-203ENSMUST00000179458 273 ntBASIC18.75■□□□□ 0.59
Urb1Q571H0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.75■□□□□ 0.59
Urb1Q571H0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Urb1Q571H0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Urb1Q571H0 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Urb1Q571H0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Urb1Q571H0 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Urb1Q571H0 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Urb1Q571H0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.74■□□□□ 0.59
Urb1Q571H0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Urb1Q571H0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.74■□□□□ 0.59
Urb1Q571H0 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Urb1Q571H0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.74■□□□□ 0.59
Urb1Q571H0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.74■□□□□ 0.59
Urb1Q571H0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.74■□□□□ 0.59
Urb1Q571H0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.74■□□□□ 0.59
Urb1Q571H0 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.74■□□□□ 0.59
Urb1Q571H0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Urb1Q571H0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.73■□□□□ 0.59
Urb1Q571H0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 105.3 ms