Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim80Q3V061 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Trim80Q3V061 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim80Q3V061 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim80Q3V061 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim80Q3V061 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim80Q3V061 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim80Q3V061 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Trim80Q3V061 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim80Q3V061 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim80Q3V061 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim80Q3V061 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trim80Q3V061 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim80Q3V061 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.85■□□□□ 0.93
Trim80Q3V061 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trim80Q3V061 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim80Q3V061 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim80Q3V061 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim80Q3V061 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim80Q3V061 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.84■□□□□ 0.93
Trim80Q3V061 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trim80Q3V061 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Trim80Q3V061 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim80Q3V061 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
Trim80Q3V061 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.83■□□□□ 0.93
Trim80Q3V061 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Trim80Q3V061 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Trim80Q3V061 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim80Q3V061 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Trim80Q3V061 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim80Q3V061 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim80Q3V061 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim80Q3V061 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.81■□□□□ 0.92
Trim80Q3V061 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Trim80Q3V061 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim80Q3V061 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim80Q3V061 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.8■□□□□ 0.92
Trim80Q3V061 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim80Q3V061 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim80Q3V061 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Gm14117-201ENSMUST00000122417 843 ntBASIC20.79■□□□□ 0.92
Trim80Q3V061 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
Trim80Q3V061 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim80Q3V061 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim80Q3V061 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms