Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Spg11Q3UHA3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Gm11421-201ENSMUST00000122124 294 ntBASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Spg11Q3UHA3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.29■□□□□ 0.68
Spg11Q3UHA3 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Spg11Q3UHA3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Spg11Q3UHA3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.29■□□□□ 0.68
Spg11Q3UHA3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Spg11Q3UHA3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Spg11Q3UHA3 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Spg11Q3UHA3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.28■□□□□ 0.68
Spg11Q3UHA3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Spg11Q3UHA3 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Spg11Q3UHA3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Spg11Q3UHA3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Gm7514-201ENSMUST00000209475 934 ntBASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Spg11Q3UHA3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Spg11Q3UHA3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.24■□□□□ 0.67
Spg11Q3UHA3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Spg11Q3UHA3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Spg11Q3UHA3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Spg11Q3UHA3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Spg11Q3UHA3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Spg11Q3UHA3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.22■□□□□ 0.67
Spg11Q3UHA3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Spg11Q3UHA3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Gm10819-201ENSMUST00000099988 561 ntBASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Gm715-201ENSMUST00000117865 831 ntBASIC19.21■□□□□ 0.67
Spg11Q3UHA3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms