Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trim43bP86448 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim43bP86448 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trim43bP86448 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Trim43bP86448 Rps24-207ENSMUST00000224568 714 ntBASIC20.92■□□□□ 0.94
Trim43bP86448 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Golph3-202ENSMUST00000226517 2359 ntBASIC20.92■□□□□ 0.94
Trim43bP86448 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trim43bP86448 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim43bP86448 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
Trim43bP86448 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.91■□□□□ 0.94
Trim43bP86448 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43bP86448 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43bP86448 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim43bP86448 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.91■□□□□ 0.94
Trim43bP86448 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Trim43bP86448 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43bP86448 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Trim43bP86448 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.9■□□□□ 0.94
Trim43bP86448 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.9■□□□□ 0.94
Trim43bP86448 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Trim43bP86448 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.9■□□□□ 0.94
Trim43bP86448 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.9■□□□□ 0.94
Trim43bP86448 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Trim43bP86448 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Trim43bP86448 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.89■□□□□ 0.93
Trim43bP86448 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43bP86448 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.89■□□□□ 0.93
Trim43bP86448 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim43bP86448 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.89■□□□□ 0.93
Trim43bP86448 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43bP86448 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43bP86448 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43bP86448 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Trim43bP86448 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.88■□□□□ 0.93
Trim43bP86448 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.88■□□□□ 0.93
Trim43bP86448 Gm45102-201ENSMUST00000207427 857 ntBASIC20.88■□□□□ 0.93
Trim43bP86448 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43bP86448 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43bP86448 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43bP86448 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43bP86448 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim43bP86448 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43bP86448 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43bP86448 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim43bP86448 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.87■□□□□ 0.93
Trim43bP86448 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43bP86448 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43bP86448 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trim43bP86448 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim43bP86448 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trim43bP86448 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim43bP86448 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trim43bP86448 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim43bP86448 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.84■□□□□ 0.93
Trim43bP86448 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Trim43bP86448 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim43bP86448 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43bP86448 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43bP86448 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43bP86448 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim43bP86448 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms