Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.07■□□□□ 0.8
Crnkl1P63154 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Crnkl1P63154 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Crnkl1P63154 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.06■□□□□ 0.8
Crnkl1P63154 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.06■□□□□ 0.8
Crnkl1P63154 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.06■□□□□ 0.8
Crnkl1P63154 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.06■□□□□ 0.8
Crnkl1P63154 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.06■□□□□ 0.8
Crnkl1P63154 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Crnkl1P63154 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Crnkl1P63154 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.05■□□□□ 0.8
Crnkl1P63154 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.05■□□□□ 0.8
Crnkl1P63154 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Crnkl1P63154 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.04■□□□□ 0.8
Crnkl1P63154 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Crnkl1P63154 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.04■□□□□ 0.8
Crnkl1P63154 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Crnkl1P63154 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Crnkl1P63154 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Crnkl1P63154 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crnkl1P63154 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crnkl1P63154 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.03■□□□□ 0.8
Crnkl1P63154 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.03■□□□□ 0.8
Crnkl1P63154 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Crnkl1P63154 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.03■□□□□ 0.8
Crnkl1P63154 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.03■□□□□ 0.8
Crnkl1P63154 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Crnkl1P63154 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crnkl1P63154 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Crnkl1P63154 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crnkl1P63154 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Crnkl1P63154 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Crnkl1P63154 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Crnkl1P63154 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Crnkl1P63154 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.02■□□□□ 0.79
Crnkl1P63154 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Crnkl1P63154 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Crnkl1P63154 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Crnkl1P63154 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Crnkl1P63154 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Crnkl1P63154 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.01■□□□□ 0.79
Crnkl1P63154 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20■□□□□ 0.79
Crnkl1P63154 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20■□□□□ 0.79
Crnkl1P63154 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Crnkl1P63154 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.99■□□□□ 0.79
Crnkl1P63154 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Crnkl1P63154 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crnkl1P63154 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crnkl1P63154 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Crnkl1P63154 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.99■□□□□ 0.79
Crnkl1P63154 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crnkl1P63154 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Crnkl1P63154 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Crnkl1P63154 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.98■□□□□ 0.79
Crnkl1P63154 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Crnkl1P63154 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Crnkl1P63154 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms