Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
ThraP63058 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.58■□□□□ 0.89
ThraP63058 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ThraP63058 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.58■□□□□ 0.88
ThraP63058 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ThraP63058 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ThraP63058 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.57■□□□□ 0.88
ThraP63058 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.57■□□□□ 0.88
ThraP63058 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ThraP63058 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.57■□□□□ 0.88
ThraP63058 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ThraP63058 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ThraP63058 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ThraP63058 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Gm21956-201ENSMUST00000179946 522 ntBASIC20.56■□□□□ 0.88
ThraP63058 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ThraP63058 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ThraP63058 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ThraP63058 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ThraP63058 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ThraP63058 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ThraP63058 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.54■□□□□ 0.88
ThraP63058 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
ThraP63058 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
ThraP63058 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ThraP63058 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ThraP63058 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Gm12922-201ENSMUST00000120626 809 ntBASIC20.53■□□□□ 0.88
ThraP63058 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ThraP63058 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.53■□□□□ 0.88
ThraP63058 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ThraP63058 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ThraP63058 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ThraP63058 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
ThraP63058 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ThraP63058 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
ThraP63058 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ThraP63058 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.51■□□□□ 0.87
ThraP63058 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ThraP63058 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ThraP63058 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.5■□□□□ 0.87
ThraP63058 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ThraP63058 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ThraP63058 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
ThraP63058 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
ThraP63058 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
ThraP63058 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.49■□□□□ 0.87
ThraP63058 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
ThraP63058 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
ThraP63058 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
ThraP63058 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.48■□□□□ 0.87
ThraP63058 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
ThraP63058 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.48■□□□□ 0.87
ThraP63058 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ThraP63058 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
ThraP63058 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ThraP63058 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
ThraP63058 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ThraP63058 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.47■□□□□ 0.87
ThraP63058 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ThraP63058 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.46■□□□□ 0.87
ThraP63058 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ThraP63058 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
ThraP63058 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ThraP63058 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ThraP63058 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.46■□□□□ 0.87
ThraP63058 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ThraP63058 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms