Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC14.55□□□□□ -0.08
Rpl39P62892 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Rpl39P62892 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Rpl39P62892 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rpl39P62892 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpl39P62892 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Rpl39P62892 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC14.54□□□□□ -0.08
Rpl39P62892 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpl39P62892 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.54□□□□□ -0.08
Rpl39P62892 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Rpl39P62892 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpl39P62892 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Rpl39P62892 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Rpl39P62892 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC14.53□□□□□ -0.08
Rpl39P62892 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC14.53□□□□□ -0.08
Rpl39P62892 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rpl39P62892 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpl39P62892 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.52□□□□□ -0.08
Rpl39P62892 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rpl39P62892 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rpl39P62892 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
Rpl39P62892 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rpl39P62892 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Rpl39P62892 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rpl39P62892 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Rpl39P62892 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Scarna2-201ENSMUST00000157560 414 ntBASIC14.51□□□□□ -0.09
Rpl39P62892 AC151971.4-201ENSMUST00000214717 704 ntBASIC14.51□□□□□ -0.09
Rpl39P62892 Gm16437-201ENSMUST00000025669 507 ntBASIC14.51□□□□□ -0.09
Rpl39P62892 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Rpl39P62892 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rpl39P62892 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Rpl39P62892 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
Rpl39P62892 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Rpl39P62892 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rpl39P62892 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC14.49□□□□□ -0.09
Rpl39P62892 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Gm9806-201ENSMUST00000051080 552 ntBASIC14.49□□□□□ -0.09
Rpl39P62892 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rpl39P62892 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC14.48□□□□□ -0.09
Rpl39P62892 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.48□□□□□ -0.09
Rpl39P62892 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 AC122428.2-201ENSMUST00000216321 1832 ntBASIC14.48□□□□□ -0.09
Rpl39P62892 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rpl39P62892 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Rpl39P62892 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rpl39P62892 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.7 ms