Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Gm9867-201ENSMUST00000192212 2647 ntBASIC12.26□□□□□ -0.45
Rps28P62858 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Rps28P62858 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rps28P62858 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rps28P62858 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rps28P62858 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rps28P62858 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rps28P62858 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC12.23□□□□□ -0.45
Rps28P62858 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Gm37352-201ENSMUST00000193908 2181 ntBASIC12.23□□□□□ -0.45
Rps28P62858 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.23□□□□□ -0.45
Rps28P62858 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rps28P62858 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rps28P62858 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rps28P62858 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Rps28P62858 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Rps28P62858 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rps28P62858 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rps28P62858 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rps28P62858 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC12.21□□□□□ -0.45
Rps28P62858 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rps28P62858 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Rps28P62858 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rps28P62858 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rps28P62858 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rps28P62858 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Rps28P62858 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Rps28P62858 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Rps28P62858 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Rps28P62858 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Rps28P62858 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC12.19□□□□□ -0.46
Rps28P62858 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rps28P62858 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Gm9885-202ENSMUST00000186234 2209 ntBASIC12.19□□□□□ -0.46
Rps28P62858 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.19□□□□□ -0.46
Rps28P62858 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rps28P62858 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rps28P62858 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Rps28P62858 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rps28P62858 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rps28P62858 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms