Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Cpne2P59108 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.06■□□□□ 0.32
Cpne2P59108 Gm7332-201ENSMUST00000118351 454 ntBASIC17.06■□□□□ 0.32
Cpne2P59108 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.06■□□□□ 0.32
Cpne2P59108 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.06■□□□□ 0.32
Cpne2P59108 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.06■□□□□ 0.32
Cpne2P59108 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
Cpne2P59108 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpne2P59108 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cpne2P59108 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Cpne2P59108 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpne2P59108 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cpne2P59108 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.04■□□□□ 0.32
Cpne2P59108 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cpne2P59108 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpne2P59108 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.03■□□□□ 0.32
Cpne2P59108 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
Cpne2P59108 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.03■□□□□ 0.32
Cpne2P59108 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.03■□□□□ 0.32
Cpne2P59108 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
Cpne2P59108 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpne2P59108 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne2P59108 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne2P59108 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne2P59108 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpne2P59108 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.02■□□□□ 0.32
Cpne2P59108 Mir6538-201ENSMUST00000183713 110 ntBASIC17.02■□□□□ 0.32
Cpne2P59108 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.02■□□□□ 0.32
Cpne2P59108 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.31
Cpne2P59108 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne2P59108 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne2P59108 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpne2P59108 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
Cpne2P59108 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Cpne2P59108 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
Cpne2P59108 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne2P59108 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cpne2P59108 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne2P59108 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cpne2P59108 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpne2P59108 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Cpne2P59108 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpne2P59108 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cpne2P59108 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Cpne2P59108 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpne2P59108 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Cpne2P59108 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.98■□□□□ 0.31
Cpne2P59108 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cpne2P59108 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms