Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox3P53784 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sox3P53784 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox3P53784 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox3P53784 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox3P53784 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sox3P53784 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Sox3P53784 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox3P53784 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.45■□□□□ 0.7
Sox3P53784 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Sox3P53784 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.44■□□□□ 0.7
Sox3P53784 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.44■□□□□ 0.7
Sox3P53784 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.44■□□□□ 0.7
Sox3P53784 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.44■□□□□ 0.7
Sox3P53784 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Gm5874-201ENSMUST00000096101 508 ntBASIC19.44■□□□□ 0.7
Sox3P53784 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox3P53784 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
Sox3P53784 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.43■□□□□ 0.7
Sox3P53784 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox3P53784 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox3P53784 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox3P53784 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox3P53784 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Sox3P53784 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sox3P53784 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox3P53784 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sox3P53784 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox3P53784 Gm7291-201ENSMUST00000199147 382 ntBASIC19.4■□□□□ 0.7
Sox3P53784 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox3P53784 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox3P53784 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sox3P53784 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox3P53784 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
Sox3P53784 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.7
Sox3P53784 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.39■□□□□ 0.69
Sox3P53784 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox3P53784 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox3P53784 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox3P53784 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.38■□□□□ 0.69
Sox3P53784 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox3P53784 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox3P53784 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox3P53784 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.37■□□□□ 0.69
Sox3P53784 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.37■□□□□ 0.69
Sox3P53784 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.37■□□□□ 0.69
Sox3P53784 Gm43017-201ENSMUST00000198296 752 ntBASIC19.37■□□□□ 0.69
Sox3P53784 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Sox3P53784 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox3P53784 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox3P53784 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox3P53784 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox3P53784 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.36■□□□□ 0.69
Sox3P53784 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox3P53784 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.36■□□□□ 0.69
Sox3P53784 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms