Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Gm13168-201ENSMUST00000121771 632 ntBASIC21.15■□□□□ 0.98
Sox1P53783 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Sox1P53783 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Sox1P53783 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.14■□□□□ 0.98
Sox1P53783 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.14■□□□□ 0.97
Sox1P53783 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Sox1P53783 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox1P53783 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox1P53783 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sox1P53783 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.13■□□□□ 0.97
Sox1P53783 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Sox1P53783 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.13■□□□□ 0.97
Sox1P53783 Gm13836-201ENSMUST00000121159 501 ntBASIC21.13■□□□□ 0.97
Sox1P53783 Mir5133-201ENSMUST00000174955 77 ntBASIC21.13■□□□□ 0.97
Sox1P53783 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox1P53783 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sox1P53783 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox1P53783 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.12■□□□□ 0.97
Sox1P53783 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sox1P53783 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sox1P53783 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox1P53783 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox1P53783 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.11■□□□□ 0.97
Sox1P53783 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC21.11■□□□□ 0.97
Sox1P53783 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sox1P53783 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox1P53783 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox1P53783 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox1P53783 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sox1P53783 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.09■□□□□ 0.97
Sox1P53783 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 Gm10812-201ENSMUST00000099864 546 ntBASIC21.09■□□□□ 0.97
Sox1P53783 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.09■□□□□ 0.97
Sox1P53783 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox1P53783 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.08■□□□□ 0.97
Sox1P53783 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.08■□□□□ 0.97
Sox1P53783 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Sox1P53783 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.07■□□□□ 0.96
Sox1P53783 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.07■□□□□ 0.96
Sox1P53783 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox1P53783 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox1P53783 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox1P53783 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox1P53783 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox1P53783 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sox1P53783 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox1P53783 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Sox1P53783 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Sox1P53783 Gm13234-201ENSMUST00000120010 747 ntBASIC21.06■□□□□ 0.96
Sox1P53783 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox1P53783 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.06■□□□□ 0.96
Sox1P53783 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox1P53783 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox1P53783 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox1P53783 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.05■□□□□ 0.96
Sox1P53783 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Sox1P53783 Gm11421-201ENSMUST00000122124 294 ntBASIC21.05■□□□□ 0.96
Sox1P53783 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sox1P53783 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.05■□□□□ 0.96
Sox1P53783 Gm43530-201ENSMUST00000195920 274 ntBASIC21.05■□□□□ 0.96
Sox1P53783 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.05■□□□□ 0.96
Sox1P53783 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox1P53783 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.05■□□□□ 0.96
Sox1P53783 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Sox1P53783 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.05■□□□□ 0.96
Sox1P53783 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox1P53783 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox1P53783 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.04■□□□□ 0.96
Sox1P53783 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.04■□□□□ 0.96
Sox1P53783 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox1P53783 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.04■□□□□ 0.96
Sox1P53783 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox1P53783 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox1P53783 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox1P53783 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sox1P53783 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.03■□□□□ 0.96
Sox1P53783 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox1P53783 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
Sox1P53783 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox1P53783 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox1P53783 Gm7514-201ENSMUST00000209475 934 ntBASIC21.03■□□□□ 0.96
Sox1P53783 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sox1P53783 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox1P53783 Reep4-203ENSMUST00000226563 1444 ntBASIC21.03■□□□□ 0.96
Sox1P53783 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox1P53783 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox1P53783 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox1P53783 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.02■□□□□ 0.96
Sox1P53783 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.02■□□□□ 0.96
Sox1P53783 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms