Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.19■□□□□ 0.34
Lhx4P53776 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx4P53776 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx4P53776 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Lhx4P53776 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.18■□□□□ 0.34
Lhx4P53776 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Lhx4P53776 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.18■□□□□ 0.34
Lhx4P53776 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.18■□□□□ 0.34
Lhx4P53776 Gm10399-202ENSMUST00000202768 748 ntBASIC17.18■□□□□ 0.34
Lhx4P53776 Gm40881-201ENSMUST00000223397 166 ntBASIC17.18■□□□□ 0.34
Lhx4P53776 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Lhx4P53776 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lhx4P53776 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Lhx4P53776 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Lhx4P53776 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.17■□□□□ 0.34
Lhx4P53776 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Lhx4P53776 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx4P53776 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx4P53776 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.16■□□□□ 0.34
Lhx4P53776 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx4P53776 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Lhx4P53776 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.15■□□□□ 0.34
Lhx4P53776 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Lhx4P53776 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.14■□□□□ 0.33
Lhx4P53776 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx4P53776 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx4P53776 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx4P53776 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Lhx4P53776 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Lhx4P53776 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Lhx4P53776 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.13■□□□□ 0.33
Lhx4P53776 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.13■□□□□ 0.33
Lhx4P53776 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.13■□□□□ 0.33
Lhx4P53776 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx4P53776 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Lhx4P53776 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lhx4P53776 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Lhx4P53776 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Lhx4P53776 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Lhx4P53776 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lhx4P53776 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.12■□□□□ 0.33
Lhx4P53776 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lhx4P53776 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx4P53776 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx4P53776 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx4P53776 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx4P53776 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Lhx4P53776 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lhx4P53776 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lhx4P53776 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Lhx4P53776 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx4P53776 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Lhx4P53776 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.1■□□□□ 0.33
Lhx4P53776 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lhx4P53776 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Lhx4P53776 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx4P53776 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Lhx4P53776 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx4P53776 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.09■□□□□ 0.33
Lhx4P53776 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lhx4P53776 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.09■□□□□ 0.33
Lhx4P53776 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx4P53776 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Lhx4P53776 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.09■□□□□ 0.33
Lhx4P53776 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx4P53776 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lhx4P53776 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms