Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RoraP51448 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RoraP51448 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RoraP51448 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RoraP51448 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RoraP51448 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RoraP51448 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RoraP51448 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RoraP51448 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RoraP51448 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RoraP51448 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RoraP51448 Serp2-204ENSMUST00000228055 705 ntBASIC19.29■□□□□ 0.68
RoraP51448 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RoraP51448 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RoraP51448 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
RoraP51448 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.28■□□□□ 0.68
RoraP51448 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RoraP51448 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
RoraP51448 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RoraP51448 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
RoraP51448 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RoraP51448 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.26■□□□□ 0.67
RoraP51448 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.26■□□□□ 0.67
RoraP51448 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RoraP51448 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RoraP51448 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RoraP51448 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RoraP51448 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RoraP51448 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RoraP51448 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RoraP51448 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RoraP51448 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RoraP51448 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RoraP51448 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
RoraP51448 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RoraP51448 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.24■□□□□ 0.67
RoraP51448 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RoraP51448 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.24■□□□□ 0.67
RoraP51448 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.24■□□□□ 0.67
RoraP51448 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.24■□□□□ 0.67
RoraP51448 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.24■□□□□ 0.67
RoraP51448 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RoraP51448 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RoraP51448 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.24■□□□□ 0.67
RoraP51448 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RoraP51448 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.23■□□□□ 0.67
RoraP51448 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.23■□□□□ 0.67
RoraP51448 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RoraP51448 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.22■□□□□ 0.67
RoraP51448 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RoraP51448 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RoraP51448 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RoraP51448 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
RoraP51448 Gm43137-201ENSMUST00000198052 594 ntBASIC19.21■□□□□ 0.67
RoraP51448 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RoraP51448 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RoraP51448 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RoraP51448 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RoraP51448 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RoraP51448 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RoraP51448 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.2■□□□□ 0.66
RoraP51448 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RoraP51448 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
RoraP51448 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RoraP51448 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RoraP51448 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.19■□□□□ 0.66
RoraP51448 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RoraP51448 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms