Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Gm15820-201ENSMUST00000201566 728 ntBASIC19.75■□□□□ 0.75
Hnf4aP49698 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hnf4aP49698 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hnf4aP49698 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hnf4aP49698 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hnf4aP49698 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Hnf4aP49698 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.74■□□□□ 0.75
Hnf4aP49698 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.74■□□□□ 0.75
Hnf4aP49698 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Hnf4aP49698 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hnf4aP49698 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hnf4aP49698 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Hnf4aP49698 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hnf4aP49698 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hnf4aP49698 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hnf4aP49698 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Hnf4aP49698 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hnf4aP49698 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hnf4aP49698 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.72■□□□□ 0.75
Hnf4aP49698 Gm40881-201ENSMUST00000223397 166 ntBASIC19.72■□□□□ 0.75
Hnf4aP49698 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hnf4aP49698 Gm5812-201ENSMUST00000061073 957 ntBASIC19.72■□□□□ 0.75
Hnf4aP49698 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hnf4aP49698 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hnf4aP49698 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hnf4aP49698 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Hnf4aP49698 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hnf4aP49698 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.7■□□□□ 0.74
Hnf4aP49698 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.7■□□□□ 0.74
Hnf4aP49698 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.7■□□□□ 0.74
Hnf4aP49698 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.7■□□□□ 0.74
Hnf4aP49698 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.7■□□□□ 0.74
Hnf4aP49698 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hnf4aP49698 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hnf4aP49698 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.69■□□□□ 0.74
Hnf4aP49698 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.69■□□□□ 0.74
Hnf4aP49698 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hnf4aP49698 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Hnf4aP49698 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Hnf4aP49698 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.68■□□□□ 0.74
Hnf4aP49698 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.68■□□□□ 0.74
Hnf4aP49698 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hnf4aP49698 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hnf4aP49698 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hnf4aP49698 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hnf4aP49698 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hnf4aP49698 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Hnf4aP49698 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hnf4aP49698 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Hnf4aP49698 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hnf4aP49698 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.66■□□□□ 0.74
Hnf4aP49698 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.66■□□□□ 0.74
Hnf4aP49698 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hnf4aP49698 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hnf4aP49698 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hnf4aP49698 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hnf4aP49698 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hnf4aP49698 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hnf4aP49698 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.65■□□□□ 0.74
Hnf4aP49698 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hnf4aP49698 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hnf4aP49698 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Hnf4aP49698 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hnf4aP49698 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Hnf4aP49698 Gm15546-201ENSMUST00000122095 826 ntBASIC19.64■□□□□ 0.73
Hnf4aP49698 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.64■□□□□ 0.73
Hnf4aP49698 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hnf4aP49698 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hnf4aP49698 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Hnf4aP49698 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hnf4aP49698 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hnf4aP49698 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms