Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Xcl1P47993 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Xcl1P47993 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.41□□□□□ -0.26
Xcl1P47993 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Xcl1P47993 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Xcl1P47993 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Xcl1P47993 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC13.4□□□□□ -0.26
Xcl1P47993 Snhg20-203ENSMUST00000182811 2153 ntBASIC13.39□□□□□ -0.27
Xcl1P47993 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Xcl1P47993 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Xcl1P47993 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC13.39□□□□□ -0.27
Xcl1P47993 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Xcl1P47993 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.39□□□□□ -0.27
Xcl1P47993 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Xcl1P47993 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Xcl1P47993 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Xcl1P47993 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Xcl1P47993 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Xcl1P47993 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Xcl1P47993 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Xcl1P47993 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Xcl1P47993 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Xcl1P47993 Gm43403-201ENSMUST00000198011 1786 ntBASIC13.35□□□□□ -0.27
Xcl1P47993 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Gm26115-201ENSMUST00000175605 87 ntBASIC13.35□□□□□ -0.27
Xcl1P47993 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC13.35□□□□□ -0.27
Xcl1P47993 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Xcl1P47993 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Xcl1P47993 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Xcl1P47993 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Xcl1P47993 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Xcl1P47993 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Xcl1P47993 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Xcl1P47993 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Xcl1P47993 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Xcl1P47993 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Xcl1P47993 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Xcl1P47993 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms