Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vps4bP46467 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Vps4bP46467 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Vps4bP46467 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.68■□□□□ 0.9
Vps4bP46467 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.68■□□□□ 0.9
Vps4bP46467 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps4bP46467 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Vps4bP46467 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vps4bP46467 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Vps4bP46467 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Vps4bP46467 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vps4bP46467 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps4bP46467 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vps4bP46467 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps4bP46467 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.66■□□□□ 0.9
Vps4bP46467 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4bP46467 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4bP46467 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4bP46467 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Vps4bP46467 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.66■□□□□ 0.9
Vps4bP46467 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vps4bP46467 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Vps4bP46467 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vps4bP46467 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps4bP46467 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vps4bP46467 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.64■□□□□ 0.89
Vps4bP46467 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vps4bP46467 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vps4bP46467 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vps4bP46467 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Vps4bP46467 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vps4bP46467 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.63■□□□□ 0.89
Vps4bP46467 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Vps4bP46467 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Vps4bP46467 Gm13238-201ENSMUST00000117655 780 ntBASIC20.63■□□□□ 0.89
Vps4bP46467 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.63■□□□□ 0.89
Vps4bP46467 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.63■□□□□ 0.89
Vps4bP46467 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Vps4bP46467 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vps4bP46467 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.62■□□□□ 0.89
Vps4bP46467 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Gm10399-202ENSMUST00000202768 748 ntBASIC20.62■□□□□ 0.89
Vps4bP46467 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Vps4bP46467 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Vps4bP46467 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Vps4bP46467 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps4bP46467 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps4bP46467 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.6■□□□□ 0.89
Vps4bP46467 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.6■□□□□ 0.89
Vps4bP46467 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vps4bP46467 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps4bP46467 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps4bP46467 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.59■□□□□ 0.89
Vps4bP46467 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
Vps4bP46467 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.59■□□□□ 0.89
Vps4bP46467 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vps4bP46467 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Vps4bP46467 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vps4bP46467 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps4bP46467 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps4bP46467 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps4bP46467 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps4bP46467 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vps4bP46467 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms