Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.35■□□□□ 0.69
Nkx2-6P43688 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nkx2-6P43688 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nkx2-6P43688 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Nkx2-6P43688 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-6P43688 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-6P43688 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nkx2-6P43688 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Nkx2-6P43688 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nkx2-6P43688 Mir7075-201ENSMUST00000184187 82 ntBASIC19.33■□□□□ 0.68
Nkx2-6P43688 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.33■□□□□ 0.68
Nkx2-6P43688 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Gm8495-201ENSMUST00000188740 694 ntBASIC19.32■□□□□ 0.68
Nkx2-6P43688 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.32■□□□□ 0.68
Nkx2-6P43688 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nkx2-6P43688 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.31■□□□□ 0.68
Nkx2-6P43688 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Nkx2-6P43688 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Nkx2-6P43688 Gm18284-201ENSMUST00000172604 624 ntBASIC19.3■□□□□ 0.68
Nkx2-6P43688 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-6P43688 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Nkx2-6P43688 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.28■□□□□ 0.68
Nkx2-6P43688 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Gm43530-201ENSMUST00000195920 274 ntBASIC19.28■□□□□ 0.68
Nkx2-6P43688 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Nkx2-6P43688 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Nkx2-6P43688 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-6P43688 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-6P43688 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-6P43688 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Nkx2-6P43688 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Nkx2-6P43688 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms