Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sox18P43680 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.62■□□□□ 0.73
Sox18P43680 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.62■□□□□ 0.73
Sox18P43680 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.62■□□□□ 0.73
Sox18P43680 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Sox18P43680 Gm10602-201ENSMUST00000098239 609 ntBASIC19.62■□□□□ 0.73
Sox18P43680 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sox18P43680 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Sox18P43680 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Sox18P43680 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox18P43680 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Sox18P43680 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Sox18P43680 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox18P43680 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sox18P43680 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.6■□□□□ 0.73
Sox18P43680 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.6■□□□□ 0.73
Sox18P43680 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sox18P43680 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox18P43680 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.59■□□□□ 0.73
Sox18P43680 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sox18P43680 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sox18P43680 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sox18P43680 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.59■□□□□ 0.73
Sox18P43680 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sox18P43680 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Sox18P43680 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.58■□□□□ 0.73
Sox18P43680 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox18P43680 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sox18P43680 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.58■□□□□ 0.72
Sox18P43680 Gm7143-201ENSMUST00000222811 859 ntBASIC19.58■□□□□ 0.72
Sox18P43680 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox18P43680 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sox18P43680 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sox18P43680 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox18P43680 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sox18P43680 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sox18P43680 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox18P43680 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sox18P43680 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox18P43680 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.57■□□□□ 0.72
Sox18P43680 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.57■□□□□ 0.72
Sox18P43680 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sox18P43680 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Sox18P43680 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.56■□□□□ 0.72
Sox18P43680 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.56■□□□□ 0.72
Sox18P43680 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.56■□□□□ 0.72
Sox18P43680 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sox18P43680 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
Sox18P43680 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.55■□□□□ 0.72
Sox18P43680 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Sox18P43680 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Sox18P43680 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sox18P43680 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox18P43680 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox18P43680 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.54■□□□□ 0.72
Sox18P43680 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sox18P43680 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Sox18P43680 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.54■□□□□ 0.72
Sox18P43680 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Sox18P43680 Gm12933-201ENSMUST00000120203 872 ntBASIC19.53■□□□□ 0.72
Sox18P43680 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox18P43680 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.53■□□□□ 0.72
Sox18P43680 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox18P43680 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Sox18P43680 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox18P43680 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox18P43680 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sox18P43680 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.52■□□□□ 0.72
Sox18P43680 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sox18P43680 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox18P43680 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sox18P43680 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sox18P43680 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Sox18P43680 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms