Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Hist1h1aP43275 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Hist1h1aP43275 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hist1h1aP43275 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.74■□□□□ 0.27
Hist1h1aP43275 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hist1h1aP43275 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.74■□□□□ 0.27
Hist1h1aP43275 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Golph3-202ENSMUST00000226517 2359 ntBASIC16.73■□□□□ 0.27
Hist1h1aP43275 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Hist1h1aP43275 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.72■□□□□ 0.27
Hist1h1aP43275 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist1h1aP43275 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Hist1h1aP43275 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist1h1aP43275 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Hist1h1aP43275 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hist1h1aP43275 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Hist1h1aP43275 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Hist1h1aP43275 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.69■□□□□ 0.26
Hist1h1aP43275 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Hist1h1aP43275 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Hist1h1aP43275 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Hist1h1aP43275 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms