Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.59■□□□□ 0.73
Cdx2P43241 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.59■□□□□ 0.73
Cdx2P43241 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdx2P43241 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.59■□□□□ 0.73
Cdx2P43241 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Cdx2P43241 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
Cdx2P43241 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cdx2P43241 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cdx2P43241 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.58■□□□□ 0.73
Cdx2P43241 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Cdx2P43241 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdx2P43241 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdx2P43241 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdx2P43241 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Cdx2P43241 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.58■□□□□ 0.72
Cdx2P43241 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdx2P43241 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.58■□□□□ 0.72
Cdx2P43241 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cdx2P43241 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdx2P43241 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Cdx2P43241 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdx2P43241 Smad6-203ENSMUST00000179458 273 ntBASIC19.57■□□□□ 0.72
Cdx2P43241 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.57■□□□□ 0.72
Cdx2P43241 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.57■□□□□ 0.72
Cdx2P43241 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.57■□□□□ 0.72
Cdx2P43241 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cdx2P43241 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.56■□□□□ 0.72
Cdx2P43241 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 Gm10849-201ENSMUST00000100397 618 ntBASIC19.56■□□□□ 0.72
Cdx2P43241 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.56■□□□□ 0.72
Cdx2P43241 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.56■□□□□ 0.72
Cdx2P43241 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Cdx2P43241 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdx2P43241 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Cdx2P43241 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Cdx2P43241 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdx2P43241 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.55■□□□□ 0.72
Cdx2P43241 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.55■□□□□ 0.72
Cdx2P43241 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cdx2P43241 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Cdx2P43241 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Cdx2P43241 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdx2P43241 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cdx2P43241 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdx2P43241 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdx2P43241 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdx2P43241 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdx2P43241 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cdx2P43241 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cdx2P43241 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.53■□□□□ 0.72
Cdx2P43241 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdx2P43241 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdx2P43241 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cdx2P43241 Gm37179-201ENSMUST00000194862 823 ntBASIC19.52■□□□□ 0.72
Cdx2P43241 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cdx2P43241 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.52■□□□□ 0.71
Cdx2P43241 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.52■□□□□ 0.71
Cdx2P43241 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.51■□□□□ 0.71
Cdx2P43241 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdx2P43241 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cdx2P43241 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cdx2P43241 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdx2P43241 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cdx2P43241 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdx2P43241 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdx2P43241 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Cdx2P43241 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
Cdx2P43241 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Cdx2P43241 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Cdx2P43241 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cdx2P43241 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdx2P43241 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdx2P43241 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cdx2P43241 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cdx2P43241 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Cdx2P43241 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms