Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Nkx2-2P42586 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-2P42586 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-2P42586 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
Nkx2-2P42586 Gm14117-201ENSMUST00000122417 843 ntBASIC18.8■□□□□ 0.6
Nkx2-2P42586 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-2P42586 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nkx2-2P42586 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Gm22238-201ENSMUST00000175222 88 ntBASIC18.79■□□□□ 0.6
Nkx2-2P42586 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Nkx2-2P42586 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Nkx2-2P42586 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.78■□□□□ 0.6
Nkx2-2P42586 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.78■□□□□ 0.6
Nkx2-2P42586 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Nkx2-2P42586 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.77■□□□□ 0.6
Nkx2-2P42586 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Nkx2-2P42586 Gm9870-201ENSMUST00000063874 645 ntBASIC18.77■□□□□ 0.6
Nkx2-2P42586 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Nkx2-2P42586 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Nkx2-2P42586 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Nkx2-2P42586 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Nkx2-2P42586 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Nkx2-2P42586 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.72■□□□□ 0.59
Nkx2-2P42586 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Nkx2-2P42586 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Nkx2-2P42586 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms