Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxa1P35582 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Foxa1P35582 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.91■□□□□ 0.62
Foxa1P35582 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
Foxa1P35582 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxa1P35582 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.91■□□□□ 0.62
Foxa1P35582 Gm7143-201ENSMUST00000222811 859 ntBASIC18.91■□□□□ 0.62
Foxa1P35582 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxa1P35582 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.91■□□□□ 0.62
Foxa1P35582 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Foxa1P35582 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Foxa1P35582 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Foxa1P35582 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Foxa1P35582 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Foxa1P35582 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Foxa1P35582 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Foxa1P35582 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.89■□□□□ 0.61
Foxa1P35582 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Foxa1P35582 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Foxa1P35582 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.89■□□□□ 0.61
Foxa1P35582 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Foxa1P35582 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.89■□□□□ 0.61
Foxa1P35582 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Foxa1P35582 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxa1P35582 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.88■□□□□ 0.61
Foxa1P35582 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxa1P35582 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxa1P35582 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxa1P35582 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxa1P35582 Gm9870-201ENSMUST00000063874 645 ntBASIC18.88■□□□□ 0.61
Foxa1P35582 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Foxa1P35582 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.88■□□□□ 0.61
Foxa1P35582 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxa1P35582 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Foxa1P35582 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxa1P35582 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.87■□□□□ 0.61
Foxa1P35582 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.87■□□□□ 0.61
Foxa1P35582 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxa1P35582 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Foxa1P35582 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxa1P35582 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Foxa1P35582 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.86■□□□□ 0.61
Foxa1P35582 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.86■□□□□ 0.61
Foxa1P35582 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.86■□□□□ 0.61
Foxa1P35582 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Foxa1P35582 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxa1P35582 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxa1P35582 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxa1P35582 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Foxa1P35582 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
Foxa1P35582 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Foxa1P35582 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Foxa1P35582 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.84■□□□□ 0.61
Foxa1P35582 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Foxa1P35582 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Foxa1P35582 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Foxa1P35582 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.83■□□□□ 0.6
Foxa1P35582 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.83■□□□□ 0.6
Foxa1P35582 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Foxa1P35582 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Foxa1P35582 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Foxa1P35582 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxa1P35582 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxa1P35582 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Foxa1P35582 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Foxa1P35582 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.82■□□□□ 0.6
Foxa1P35582 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Foxa1P35582 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Foxa1P35582 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Foxa1P35582 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Foxa1P35582 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms