Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Nedd8P29595 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nedd8P29595 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Nedd8P29595 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Nedd8P29595 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nedd8P29595 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nedd8P29595 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd8P29595 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd8P29595 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd8P29595 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Nedd8P29595 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd8P29595 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.87■□□□□ 0.61
Nedd8P29595 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nedd8P29595 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.87■□□□□ 0.61
Nedd8P29595 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Nedd8P29595 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Nedd8P29595 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nedd8P29595 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nedd8P29595 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.85■□□□□ 0.61
Nedd8P29595 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nedd8P29595 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Nedd8P29595 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nedd8P29595 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nedd8P29595 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Nedd8P29595 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
Nedd8P29595 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.84■□□□□ 0.61
Nedd8P29595 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nedd8P29595 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd8P29595 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd8P29595 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Nedd8P29595 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.83■□□□□ 0.61
Nedd8P29595 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.83■□□□□ 0.6
Nedd8P29595 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Nedd8P29595 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd8P29595 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd8P29595 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nedd8P29595 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd8P29595 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd8P29595 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.82■□□□□ 0.6
Nedd8P29595 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Nedd8P29595 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Nedd8P29595 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.82■□□□□ 0.6
Nedd8P29595 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd8P29595 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd8P29595 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nedd8P29595 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.81■□□□□ 0.6
Nedd8P29595 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.81■□□□□ 0.6
Nedd8P29595 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nedd8P29595 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nedd8P29595 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
Nedd8P29595 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nedd8P29595 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd8P29595 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd8P29595 Mir3960-201ENSMUST00000198213 73 ntBASIC18.79■□□□□ 0.6
Nedd8P29595 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nedd8P29595 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nedd8P29595 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nedd8P29595 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms