Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vcam1P29533 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vcam1P29533 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.84■■□□□ 1.41
Vcam1P29533 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcam1P29533 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Vcam1P29533 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcam1P29533 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
Vcam1P29533 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Vcam1P29533 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vcam1P29533 Spcs1-204ENSMUST00000226782 949 ntBASIC23.83■■□□□ 1.41
Vcam1P29533 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Vcam1P29533 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vcam1P29533 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vcam1P29533 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vcam1P29533 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
Vcam1P29533 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Vcam1P29533 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Gm8495-201ENSMUST00000188740 694 ntBASIC23.82■■□□□ 1.4
Vcam1P29533 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.82■■□□□ 1.4
Vcam1P29533 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vcam1P29533 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Vcam1P29533 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vcam1P29533 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vcam1P29533 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vcam1P29533 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vcam1P29533 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.81■■□□□ 1.4
Vcam1P29533 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Vcam1P29533 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.81■■□□□ 1.4
Vcam1P29533 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC23.8■■□□□ 1.4
Vcam1P29533 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.8■■□□□ 1.4
Vcam1P29533 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vcam1P29533 Gm5913-201ENSMUST00000119397 1399 ntBASIC23.79■■□□□ 1.4
Vcam1P29533 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.79■■□□□ 1.4
Vcam1P29533 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.79■■□□□ 1.4
Vcam1P29533 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC23.79■■□□□ 1.4
Vcam1P29533 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vcam1P29533 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcam1P29533 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcam1P29533 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcam1P29533 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
Vcam1P29533 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.78■■□□□ 1.4
Vcam1P29533 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Vcam1P29533 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vcam1P29533 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vcam1P29533 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.77■■□□□ 1.4
Vcam1P29533 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vcam1P29533 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.77■■□□□ 1.4
Vcam1P29533 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Vcam1P29533 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Vcam1P29533 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vcam1P29533 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vcam1P29533 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.75■■□□□ 1.39
Vcam1P29533 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Vcam1P29533 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vcam1P29533 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC23.74■■□□□ 1.39
Vcam1P29533 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.74■■□□□ 1.39
Vcam1P29533 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC23.74■■□□□ 1.39
Vcam1P29533 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Vcam1P29533 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Vcam1P29533 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vcam1P29533 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vcam1P29533 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Vcam1P29533 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vcam1P29533 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vcam1P29533 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vcam1P29533 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vcam1P29533 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.72■■□□□ 1.39
Vcam1P29533 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.72■■□□□ 1.39
Vcam1P29533 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vcam1P29533 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Vcam1P29533 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vcam1P29533 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vcam1P29533 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.71■■□□□ 1.39
Vcam1P29533 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vcam1P29533 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 138.5 ms