Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rb1P13405 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rb1P13405 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rb1P13405 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Rb1P13405 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rb1P13405 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.67■□□□□ 0.9
Rb1P13405 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rb1P13405 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.67■□□□□ 0.9
Rb1P13405 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.66■□□□□ 0.9
Rb1P13405 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rb1P13405 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rb1P13405 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rb1P13405 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rb1P13405 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.65■□□□□ 0.9
Rb1P13405 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.65■□□□□ 0.9
Rb1P13405 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.65■□□□□ 0.9
Rb1P13405 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rb1P13405 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rb1P13405 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Rb1P13405 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rb1P13405 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rb1P13405 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.64■□□□□ 0.9
Rb1P13405 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.64■□□□□ 0.9
Rb1P13405 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rb1P13405 Gm8495-201ENSMUST00000188740 694 ntBASIC20.64■□□□□ 0.89
Rb1P13405 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rb1P13405 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rb1P13405 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rb1P13405 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Rb1P13405 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rb1P13405 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.64■□□□□ 0.89
Rb1P13405 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rb1P13405 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rb1P13405 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.63■□□□□ 0.89
Rb1P13405 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.63■□□□□ 0.89
Rb1P13405 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.63■□□□□ 0.89
Rb1P13405 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rb1P13405 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rb1P13405 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.62■□□□□ 0.89
Rb1P13405 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rb1P13405 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rb1P13405 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rb1P13405 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Rb1P13405 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rb1P13405 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.62■□□□□ 0.89
Rb1P13405 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rb1P13405 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rb1P13405 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rb1P13405 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rb1P13405 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rb1P13405 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.61■□□□□ 0.89
Rb1P13405 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rb1P13405 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rb1P13405 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.6■□□□□ 0.89
Rb1P13405 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
Rb1P13405 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rb1P13405 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rb1P13405 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rb1P13405 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.59■□□□□ 0.89
Rb1P13405 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.59■□□□□ 0.89
Rb1P13405 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rb1P13405 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rb1P13405 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rb1P13405 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rb1P13405 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rb1P13405 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rb1P13405 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.58■□□□□ 0.89
Rb1P13405 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rb1P13405 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rb1P13405 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.58■□□□□ 0.89
Rb1P13405 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.58■□□□□ 0.89
Rb1P13405 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rb1P13405 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
Rb1P13405 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rb1P13405 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rb1P13405 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Rb1P13405 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Gm18284-201ENSMUST00000172604 624 ntBASIC20.57■□□□□ 0.88
Rb1P13405 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rb1P13405 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms