Protein–RNA interactions for Protein: P08046

Egr1, Early growth response protein 1, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Egr1P08046 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Egr1P08046 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Egr1P08046 Gm4968-201ENSMUST00000071458 858 ntBASIC19.23■□□□□ 0.67
Egr1P08046 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.23■□□□□ 0.67
Egr1P08046 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Egr1P08046 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.22■□□□□ 0.67
Egr1P08046 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 Mir6982-201ENSMUST00000184354 68 ntBASIC19.22■□□□□ 0.67
Egr1P08046 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Egr1P08046 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Egr1P08046 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Egr1P08046 Mir5133-201ENSMUST00000174955 77 ntBASIC19.21■□□□□ 0.67
Egr1P08046 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Egr1P08046 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Egr1P08046 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Egr1P08046 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Egr1P08046 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Egr1P08046 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Egr1P08046 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.2■□□□□ 0.66
Egr1P08046 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Egr1P08046 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.2■□□□□ 0.66
Egr1P08046 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Egr1P08046 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Egr1P08046 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.19■□□□□ 0.66
Egr1P08046 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Egr1P08046 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Egr1P08046 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Egr1P08046 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Egr1P08046 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Egr1P08046 Reep4-203ENSMUST00000226563 1444 ntBASIC19.18■□□□□ 0.66
Egr1P08046 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Egr1P08046 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.18■□□□□ 0.66
Egr1P08046 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Egr1P08046 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Egr1P08046 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.17■□□□□ 0.66
Egr1P08046 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.17■□□□□ 0.66
Egr1P08046 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.17■□□□□ 0.66
Egr1P08046 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Egr1P08046 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.17■□□□□ 0.66
Egr1P08046 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.17■□□□□ 0.66
Egr1P08046 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Egr1P08046 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Egr1P08046 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.16■□□□□ 0.66
Egr1P08046 Gm13234-201ENSMUST00000120010 747 ntBASIC19.16■□□□□ 0.66
Egr1P08046 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Egr1P08046 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Egr1P08046 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Egr1P08046 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.16■□□□□ 0.66
Egr1P08046 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Egr1P08046 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Gm13168-201ENSMUST00000121771 632 ntBASIC19.15■□□□□ 0.66
Egr1P08046 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.15■□□□□ 0.66
Egr1P08046 Gm7514-201ENSMUST00000209475 934 ntBASIC19.15■□□□□ 0.66
Egr1P08046 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.15■□□□□ 0.66
Egr1P08046 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Egr1P08046 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Egr1P08046 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Egr1P08046 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Egr1P08046 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Egr1P08046 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Egr1P08046 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Egr1P08046 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Egr1P08046 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Egr1P08046 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.13■□□□□ 0.65
Egr1P08046 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Egr1P08046 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Egr1P08046 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Egr1P08046 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Egr1P08046 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms