Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CopeO89079 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CopeO89079 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CopeO89079 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CopeO89079 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.05■□□□□ 0.96
CopeO89079 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Gm11175-201ENSMUST00000116172 543 ntBASIC21.05■□□□□ 0.96
CopeO89079 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CopeO89079 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.04■□□□□ 0.96
CopeO89079 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CopeO89079 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CopeO89079 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.04■□□□□ 0.96
CopeO89079 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.04■□□□□ 0.96
CopeO89079 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CopeO89079 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.04■□□□□ 0.96
CopeO89079 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CopeO89079 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CopeO89079 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CopeO89079 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.04■□□□□ 0.96
CopeO89079 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CopeO89079 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CopeO89079 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.03■□□□□ 0.96
CopeO89079 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CopeO89079 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CopeO89079 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CopeO89079 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CopeO89079 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.03■□□□□ 0.96
CopeO89079 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.03■□□□□ 0.96
CopeO89079 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CopeO89079 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
CopeO89079 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CopeO89079 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.02■□□□□ 0.96
CopeO89079 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CopeO89079 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.02■□□□□ 0.96
CopeO89079 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CopeO89079 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CopeO89079 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CopeO89079 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CopeO89079 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
CopeO89079 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CopeO89079 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Gm10420-201ENSMUST00000121713 882 ntBASIC21.01■□□□□ 0.95
CopeO89079 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.01■□□□□ 0.95
CopeO89079 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CopeO89079 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CopeO89079 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CopeO89079 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21■□□□□ 0.95
CopeO89079 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21■□□□□ 0.95
CopeO89079 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CopeO89079 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CopeO89079 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CopeO89079 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CopeO89079 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.98■□□□□ 0.95
CopeO89079 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CopeO89079 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CopeO89079 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CopeO89079 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CopeO89079 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CopeO89079 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms