Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.18■□□□□ 0.5
Hdac3O88895 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Hdac3O88895 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Hdac3O88895 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.17■□□□□ 0.5
Hdac3O88895 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Hdac3O88895 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac3O88895 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac3O88895 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Hdac3O88895 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.16■□□□□ 0.5
Hdac3O88895 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.16■□□□□ 0.5
Hdac3O88895 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac3O88895 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Hdac3O88895 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Hdac3O88895 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Hdac3O88895 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.15■□□□□ 0.5
Hdac3O88895 Gm10232-201ENSMUST00000089221 720 ntBASIC18.15■□□□□ 0.5
Hdac3O88895 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.15■□□□□ 0.5
Hdac3O88895 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Hdac3O88895 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.14■□□□□ 0.5
Hdac3O88895 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Hdac3O88895 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Hdac3O88895 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.14■□□□□ 0.49
Hdac3O88895 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.14■□□□□ 0.49
Hdac3O88895 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hdac3O88895 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Hdac3O88895 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
Hdac3O88895 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
Hdac3O88895 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Hdac3O88895 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.13■□□□□ 0.49
Hdac3O88895 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Hdac3O88895 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.13■□□□□ 0.49
Hdac3O88895 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Hdac3O88895 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Hdac3O88895 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.12■□□□□ 0.49
Hdac3O88895 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Hdac3O88895 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Hdac3O88895 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.11■□□□□ 0.49
Hdac3O88895 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Hdac3O88895 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Hdac3O88895 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Hdac3O88895 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac3O88895 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.1■□□□□ 0.49
Hdac3O88895 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac3O88895 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac3O88895 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac3O88895 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.1■□□□□ 0.49
Hdac3O88895 Gm10399-202ENSMUST00000202768 748 ntBASIC18.1■□□□□ 0.49
Hdac3O88895 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Hdac3O88895 Gm5812-201ENSMUST00000061073 957 ntBASIC18.1■□□□□ 0.49
Hdac3O88895 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Hdac3O88895 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Hdac3O88895 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Hdac3O88895 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Hdac3O88895 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac3O88895 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Hdac3O88895 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Hdac3O88895 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms