Protein–RNA interactions for Protein: O88890

Sh2d1a, SH2 domain-containing protein 1A, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d1aO88890 Gm43566-201ENSMUST00000196851 808 ntBASIC14.37□□□□□ -0.11
Sh2d1aO88890 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh2d1aO88890 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Sh2d1aO88890 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Sh2d1aO88890 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Gm16464-201ENSMUST00000117815 1095 ntBASIC14.35□□□□□ -0.11
Sh2d1aO88890 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2d1aO88890 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.35□□□□□ -0.11
Sh2d1aO88890 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Sh2d1aO88890 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Sh2d1aO88890 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Sh2d1aO88890 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.11
Sh2d1aO88890 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Sh2d1aO88890 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Sh2d1aO88890 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Gm10620-201ENSMUST00000098379 1332 ntBASIC14.31□□□□□ -0.12
Sh2d1aO88890 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.31□□□□□ -0.12
Sh2d1aO88890 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Sh2d1aO88890 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Gm10232-201ENSMUST00000089221 720 ntBASIC14.3□□□□□ -0.12
Sh2d1aO88890 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.3□□□□□ -0.12
Sh2d1aO88890 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Sh2d1aO88890 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.29□□□□□ -0.12
Sh2d1aO88890 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh2d1aO88890 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms