Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hcn3O88705 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Hcn3O88705 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.55■□□□□ 0.72
Hcn3O88705 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Hcn3O88705 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.55■□□□□ 0.72
Hcn3O88705 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Hcn3O88705 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hcn3O88705 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.54■□□□□ 0.72
Hcn3O88705 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hcn3O88705 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Hcn3O88705 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hcn3O88705 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Hcn3O88705 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.53■□□□□ 0.72
Hcn3O88705 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hcn3O88705 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.53■□□□□ 0.72
Hcn3O88705 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.52■□□□□ 0.72
Hcn3O88705 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn3O88705 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn3O88705 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Hcn3O88705 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn3O88705 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.52■□□□□ 0.72
Hcn3O88705 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hcn3O88705 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hcn3O88705 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hcn3O88705 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hcn3O88705 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hcn3O88705 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Hcn3O88705 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Hcn3O88705 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Hcn3O88705 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn3O88705 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.48■□□□□ 0.71
Hcn3O88705 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Hcn3O88705 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn3O88705 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Hcn3O88705 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Hcn3O88705 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Hcn3O88705 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn3O88705 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn3O88705 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn3O88705 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn3O88705 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hcn3O88705 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hcn3O88705 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.45■□□□□ 0.7
Hcn3O88705 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hcn3O88705 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hcn3O88705 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms