Protein–RNA interactions for Protein: O88685

Psmc3, 26S proteasome regulatory subunit 6A, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc3O88685 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Psmc3O88685 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Psmc3O88685 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
Psmc3O88685 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Psmc3O88685 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Psmc3O88685 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Psmc3O88685 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.6■■□□□ 1.05
Psmc3O88685 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.59■■□□□ 1.05
Psmc3O88685 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.59■■□□□ 1.05
Psmc3O88685 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 Gm5874-201ENSMUST00000096101 508 ntBASIC21.59■■□□□ 1.05
Psmc3O88685 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Psmc3O88685 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Psmc3O88685 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Gm43173-201ENSMUST00000202246 593 ntBASIC21.58■■□□□ 1.05
Psmc3O88685 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Psmc3O88685 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Psmc3O88685 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
Psmc3O88685 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Psmc3O88685 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Psmc3O88685 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Psmc3O88685 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Psmc3O88685 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Psmc3O88685 Gm12251-201ENSMUST00000117893 792 ntBASIC21.56■■□□□ 1.04
Psmc3O88685 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Psmc3O88685 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Psmc3O88685 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.56■■□□□ 1.04
Psmc3O88685 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.55■■□□□ 1.04
Psmc3O88685 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Psmc3O88685 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Psmc3O88685 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.54■■□□□ 1.04
Psmc3O88685 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.54■■□□□ 1.04
Psmc3O88685 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Psmc3O88685 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Psmc3O88685 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Gm29257-201ENSMUST00000186115 639 ntBASIC21.53■■□□□ 1.04
Psmc3O88685 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.53■■□□□ 1.04
Psmc3O88685 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Psmc3O88685 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Psmc3O88685 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.53■■□□□ 1.04
Psmc3O88685 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Psmc3O88685 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Psmc3O88685 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Psmc3O88685 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Psmc3O88685 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Psmc3O88685 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Psmc3O88685 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Psmc3O88685 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Psmc3O88685 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.51■■□□□ 1.03
Psmc3O88685 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Psmc3O88685 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Psmc3O88685 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Psmc3O88685 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.5■■□□□ 1.03
Psmc3O88685 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.5■■□□□ 1.03
Psmc3O88685 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.5■■□□□ 1.03
Psmc3O88685 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Psmc3O88685 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 145.9 ms