Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC23.19■■□□□ 1.3
Becn1O88597 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Becn1O88597 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Becn1O88597 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
Becn1O88597 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.19■■□□□ 1.3
Becn1O88597 Gm12366-201ENSMUST00000121722 873 ntBASIC23.19■■□□□ 1.3
Becn1O88597 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.19■■□□□ 1.3
Becn1O88597 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.19■■□□□ 1.3
Becn1O88597 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.19■■□□□ 1.3
Becn1O88597 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.19■■□□□ 1.3
Becn1O88597 Gm5786-201ENSMUST00000085368 882 ntBASIC23.19■■□□□ 1.3
Becn1O88597 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC23.19■■□□□ 1.3
Becn1O88597 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Becn1O88597 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Becn1O88597 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Becn1O88597 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Becn1O88597 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Becn1O88597 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Becn1O88597 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Becn1O88597 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC23.18■■□□□ 1.3
Becn1O88597 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Becn1O88597 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Becn1O88597 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.18■■□□□ 1.3
Becn1O88597 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Becn1O88597 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Becn1O88597 Gm44428-201ENSMUST00000204474 874 ntBASIC23.17■■□□□ 1.3
Becn1O88597 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.17■■□□□ 1.3
Becn1O88597 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Becn1O88597 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
Becn1O88597 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Becn1O88597 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Becn1O88597 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Becn1O88597 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.16■■□□□ 1.3
Becn1O88597 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC23.16■■□□□ 1.3
Becn1O88597 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Becn1O88597 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Becn1O88597 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Becn1O88597 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Becn1O88597 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Becn1O88597 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.16■■□□□ 1.3
Becn1O88597 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC23.15■■□□□ 1.3
Becn1O88597 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Becn1O88597 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC23.15■■□□□ 1.3
Becn1O88597 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Becn1O88597 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Becn1O88597 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC23.15■■□□□ 1.3
Becn1O88597 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Becn1O88597 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
Becn1O88597 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.3
Becn1O88597 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Becn1O88597 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Becn1O88597 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.14■■□□□ 1.29
Becn1O88597 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.14■■□□□ 1.29
Becn1O88597 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Becn1O88597 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Becn1O88597 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Becn1O88597 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.14■■□□□ 1.29
Becn1O88597 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.13■■□□□ 1.29
Becn1O88597 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Becn1O88597 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Becn1O88597 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Becn1O88597 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Gm44949-201ENSMUST00000206423 1450 ntBASIC23.12■■□□□ 1.29
Becn1O88597 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Gm14523-201ENSMUST00000117260 558 ntBASIC23.12■■□□□ 1.29
Becn1O88597 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Becn1O88597 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Becn1O88597 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.11■■□□□ 1.29
Becn1O88597 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Becn1O88597 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Becn1O88597 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Becn1O88597 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Becn1O88597 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Becn1O88597 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Becn1O88597 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Becn1O88597 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Becn1O88597 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.1■■□□□ 1.29
Becn1O88597 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
Becn1O88597 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Becn1O88597 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Becn1O88597 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Becn1O88597 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.09■■□□□ 1.29
Becn1O88597 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Becn1O88597 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms