Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capns1O88456 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Capns1O88456 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Capns1O88456 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Capns1O88456 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capns1O88456 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capns1O88456 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
Capns1O88456 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capns1O88456 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Capns1O88456 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.76■□□□□ 0.59
Capns1O88456 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Capns1O88456 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capns1O88456 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Capns1O88456 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capns1O88456 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Capns1O88456 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Capns1O88456 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Capns1O88456 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.75■□□□□ 0.59
Capns1O88456 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.75■□□□□ 0.59
Capns1O88456 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capns1O88456 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Capns1O88456 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.74■□□□□ 0.59
Capns1O88456 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.74■□□□□ 0.59
Capns1O88456 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Capns1O88456 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.74■□□□□ 0.59
Capns1O88456 Gm14117-201ENSMUST00000122417 843 ntBASIC18.74■□□□□ 0.59
Capns1O88456 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.74■□□□□ 0.59
Capns1O88456 Nsd1-203ENSMUST00000224156 1149 ntBASIC18.74■□□□□ 0.59
Capns1O88456 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Capns1O88456 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capns1O88456 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capns1O88456 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Capns1O88456 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capns1O88456 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capns1O88456 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Capns1O88456 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.72■□□□□ 0.59
Capns1O88456 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.72■□□□□ 0.59
Capns1O88456 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Capns1O88456 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.72■□□□□ 0.59
Capns1O88456 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Capns1O88456 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Capns1O88456 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Capns1O88456 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.71■□□□□ 0.59
Capns1O88456 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.71■□□□□ 0.59
Capns1O88456 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.71■□□□□ 0.59
Capns1O88456 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Capns1O88456 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.7■□□□□ 0.58
Capns1O88456 Gm45444-201ENSMUST00000211394 898 ntBASIC18.7■□□□□ 0.58
Capns1O88456 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.7■□□□□ 0.58
Capns1O88456 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Capns1O88456 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.69■□□□□ 0.58
Capns1O88456 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Capns1O88456 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capns1O88456 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capns1O88456 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Capns1O88456 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.69■□□□□ 0.58
Capns1O88456 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.69■□□□□ 0.58
Capns1O88456 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.69■□□□□ 0.58
Capns1O88456 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Capns1O88456 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Capns1O88456 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Capns1O88456 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Capns1O88456 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Capns1O88456 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Capns1O88456 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Capns1O88456 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms