Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Vti1bO88384 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.35■□□□□ 0.69
Vti1bO88384 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.35■□□□□ 0.69
Vti1bO88384 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Vti1bO88384 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.35■□□□□ 0.69
Vti1bO88384 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vti1bO88384 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vti1bO88384 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Vti1bO88384 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.34■□□□□ 0.69
Vti1bO88384 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vti1bO88384 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.34■□□□□ 0.69
Vti1bO88384 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vti1bO88384 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Vti1bO88384 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.34■□□□□ 0.69
Vti1bO88384 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Vti1bO88384 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Vti1bO88384 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.34■□□□□ 0.69
Vti1bO88384 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vti1bO88384 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vti1bO88384 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Vti1bO88384 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Vti1bO88384 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Vti1bO88384 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vti1bO88384 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vti1bO88384 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Vti1bO88384 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.33■□□□□ 0.68
Vti1bO88384 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Vti1bO88384 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Vti1bO88384 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.31■□□□□ 0.68
Vti1bO88384 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Vti1bO88384 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Gm5812-201ENSMUST00000061073 957 ntBASIC19.31■□□□□ 0.68
Vti1bO88384 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Vti1bO88384 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.31■□□□□ 0.68
Vti1bO88384 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.31■□□□□ 0.68
Vti1bO88384 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Vti1bO88384 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.31■□□□□ 0.68
Vti1bO88384 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vti1bO88384 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Vti1bO88384 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vti1bO88384 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Vti1bO88384 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.3■□□□□ 0.68
Vti1bO88384 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Vti1bO88384 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Vti1bO88384 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vti1bO88384 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vti1bO88384 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Vti1bO88384 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.29■□□□□ 0.68
Vti1bO88384 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.29■□□□□ 0.68
Vti1bO88384 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Vti1bO88384 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Vti1bO88384 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.29■□□□□ 0.68
Vti1bO88384 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Vti1bO88384 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.28■□□□□ 0.68
Vti1bO88384 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Vti1bO88384 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1bO88384 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.27■□□□□ 0.68
Vti1bO88384 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1bO88384 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Vti1bO88384 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Vti1bO88384 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Vti1bO88384 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1bO88384 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Vti1bO88384 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Vti1bO88384 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.26■□□□□ 0.67
Vti1bO88384 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.26■□□□□ 0.67
Vti1bO88384 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.26■□□□□ 0.67
Vti1bO88384 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Vti1bO88384 Gm10232-201ENSMUST00000089221 720 ntBASIC19.26■□□□□ 0.67
Vti1bO88384 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vti1bO88384 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Vti1bO88384 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms