Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim1O70400 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim1O70400 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.21■□□□□ 0.83
Pdlim1O70400 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Pdlim1O70400 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim1O70400 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim1O70400 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pdlim1O70400 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim1O70400 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.2■□□□□ 0.82
Pdlim1O70400 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim1O70400 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim1O70400 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pdlim1O70400 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pdlim1O70400 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pdlim1O70400 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Pdlim1O70400 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.18■□□□□ 0.82
Pdlim1O70400 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.18■□□□□ 0.82
Pdlim1O70400 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.18■□□□□ 0.82
Pdlim1O70400 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pdlim1O70400 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim1O70400 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim1O70400 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim1O70400 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.17■□□□□ 0.82
Pdlim1O70400 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
Pdlim1O70400 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim1O70400 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pdlim1O70400 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Gm9847-201ENSMUST00000052528 599 ntBASIC20.16■□□□□ 0.82
Pdlim1O70400 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pdlim1O70400 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
Pdlim1O70400 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.15■□□□□ 0.82
Pdlim1O70400 Gm43530-201ENSMUST00000195920 274 ntBASIC20.15■□□□□ 0.82
Pdlim1O70400 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.15■□□□□ 0.82
Pdlim1O70400 Golgb1-201ENSMUST00000023534 498 ntBASIC20.15■□□□□ 0.82
Pdlim1O70400 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim1O70400 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Pdlim1O70400 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Pdlim1O70400 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Pdlim1O70400 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.14■□□□□ 0.82
Pdlim1O70400 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim1O70400 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim1O70400 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim1O70400 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.14■□□□□ 0.81
Pdlim1O70400 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim1O70400 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Pdlim1O70400 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Pdlim1O70400 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.13■□□□□ 0.81
Pdlim1O70400 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Pdlim1O70400 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Pdlim1O70400 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Pdlim1O70400 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.12■□□□□ 0.81
Pdlim1O70400 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Pdlim1O70400 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.11■□□□□ 0.81
Pdlim1O70400 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pdlim1O70400 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Pdlim1O70400 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pdlim1O70400 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Pdlim1O70400 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Pdlim1O70400 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pdlim1O70400 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms