Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Per2O54943 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.31■■□□□ 1
Per2O54943 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.31■■□□□ 1
Per2O54943 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.31■■□□□ 1
Per2O54943 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Per2O54943 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Per2O54943 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Per2O54943 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Per2O54943 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.3■■□□□ 1
Per2O54943 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.3■■□□□ 1
Per2O54943 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
Per2O54943 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.3■■□□□ 1
Per2O54943 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Per2O54943 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Per2O54943 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.29■■□□□ 1
Per2O54943 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Per2O54943 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Per2O54943 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Per2O54943 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Per2O54943 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.28■■□□□ 1
Per2O54943 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.28■■□□□ 1
Per2O54943 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.28■■□□□ 1
Per2O54943 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.28■■□□□ 1
Per2O54943 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Per2O54943 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Gm40881-201ENSMUST00000223397 166 ntBASIC21.27■■□□□ 1
Per2O54943 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Per2O54943 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.26■□□□□ 0.99
Per2O54943 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Per2O54943 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Per2O54943 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.26■□□□□ 0.99
Per2O54943 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Per2O54943 Gm15820-201ENSMUST00000201566 728 ntBASIC21.26■□□□□ 0.99
Per2O54943 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Per2O54943 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.26■□□□□ 0.99
Per2O54943 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Per2O54943 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.26■□□□□ 0.99
Per2O54943 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Per2O54943 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.25■□□□□ 0.99
Per2O54943 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Per2O54943 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.25■□□□□ 0.99
Per2O54943 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.25■□□□□ 0.99
Per2O54943 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Per2O54943 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Per2O54943 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Per2O54943 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.24■□□□□ 0.99
Per2O54943 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Per2O54943 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Per2O54943 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Per2O54943 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Per2O54943 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Per2O54943 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.24■□□□□ 0.99
Per2O54943 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Per2O54943 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Per2O54943 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Per2O54943 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Per2O54943 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Per2O54943 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Per2O54943 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Per2O54943 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Per2O54943 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Per2O54943 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Per2O54943 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Per2O54943 Gm5812-201ENSMUST00000061073 957 ntBASIC21.22■□□□□ 0.99
Per2O54943 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
Per2O54943 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.21■□□□□ 0.99
Per2O54943 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.21■□□□□ 0.99
Per2O54943 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Per2O54943 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.2■□□□□ 0.98
Per2O54943 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Per2O54943 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.2■□□□□ 0.98
Per2O54943 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Per2O54943 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Per2O54943 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Per2O54943 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms