Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Npc1O35604 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Npc1O35604 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.9■□□□□ 0.78
Npc1O35604 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Npc1O35604 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.9■□□□□ 0.78
Npc1O35604 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.9■□□□□ 0.78
Npc1O35604 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Npc1O35604 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Npc1O35604 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Npc1O35604 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.89■□□□□ 0.77
Npc1O35604 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.89■□□□□ 0.77
Npc1O35604 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.89■□□□□ 0.77
Npc1O35604 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
Npc1O35604 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1O35604 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1O35604 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Npc1O35604 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.88■□□□□ 0.77
Npc1O35604 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.88■□□□□ 0.77
Npc1O35604 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1O35604 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.88■□□□□ 0.77
Npc1O35604 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1O35604 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Npc1O35604 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Npc1O35604 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.87■□□□□ 0.77
Npc1O35604 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Npc1O35604 Golgb1-201ENSMUST00000023534 498 ntBASIC19.87■□□□□ 0.77
Npc1O35604 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.87■□□□□ 0.77
Npc1O35604 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Npc1O35604 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Npc1O35604 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Npc1O35604 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Gm7143-201ENSMUST00000222811 859 ntBASIC19.86■□□□□ 0.77
Npc1O35604 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Npc1O35604 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Npc1O35604 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.86■□□□□ 0.77
Npc1O35604 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Npc1O35604 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1O35604 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1O35604 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Npc1O35604 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Npc1O35604 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.85■□□□□ 0.77
Npc1O35604 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Npc1O35604 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Npc1O35604 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Npc1O35604 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Npc1O35604 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Npc1O35604 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Npc1O35604 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1O35604 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.83■□□□□ 0.76
Npc1O35604 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Npc1O35604 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1O35604 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1O35604 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Npc1O35604 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1O35604 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Npc1O35604 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Npc1O35604 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
Npc1O35604 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Npc1O35604 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1O35604 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.81■□□□□ 0.76
Npc1O35604 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.81■□□□□ 0.76
Npc1O35604 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1O35604 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Npc1O35604 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Npc1O35604 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Npc1O35604 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.8■□□□□ 0.76
Npc1O35604 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.8■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms