Protein–RNA interactions for Protein: O35464

Sema6a, Semaphorin-6A, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema6aO35464 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema6aO35464 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sema6aO35464 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.44■□□□□ 0.7
Sema6aO35464 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Sema6aO35464 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema6aO35464 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sema6aO35464 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
Sema6aO35464 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.43■□□□□ 0.7
Sema6aO35464 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Sema6aO35464 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Sema6aO35464 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema6aO35464 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema6aO35464 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema6aO35464 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.42■□□□□ 0.7
Sema6aO35464 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema6aO35464 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sema6aO35464 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sema6aO35464 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sema6aO35464 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sema6aO35464 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sema6aO35464 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema6aO35464 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Sema6aO35464 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Sema6aO35464 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sema6aO35464 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.4■□□□□ 0.7
Sema6aO35464 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sema6aO35464 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Sema6aO35464 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sema6aO35464 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sema6aO35464 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sema6aO35464 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sema6aO35464 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sema6aO35464 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Sema6aO35464 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sema6aO35464 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.39■□□□□ 0.69
Sema6aO35464 Gm44428-201ENSMUST00000204474 874 ntBASIC19.39■□□□□ 0.69
Sema6aO35464 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sema6aO35464 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sema6aO35464 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sema6aO35464 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sema6aO35464 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sema6aO35464 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sema6aO35464 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sema6aO35464 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sema6aO35464 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sema6aO35464 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sema6aO35464 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sema6aO35464 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.37■□□□□ 0.69
Sema6aO35464 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Sema6aO35464 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.37■□□□□ 0.69
Sema6aO35464 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sema6aO35464 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.36■□□□□ 0.69
Sema6aO35464 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
Sema6aO35464 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.36■□□□□ 0.69
Sema6aO35464 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sema6aO35464 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms