Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC26.71■■□□□ 1.87
Col15a1O35206 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Gm10209-201ENSMUST00000203397 1607 ntBASIC26.71■■□□□ 1.87
Col15a1O35206 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Col15a1O35206 Gm42418-201ENSMUST00000182010 1831 ntBASIC26.7■■□□□ 1.87
Col15a1O35206 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col15a1O35206 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col15a1O35206 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col15a1O35206 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC26.7■■□□□ 1.86
Col15a1O35206 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Col15a1O35206 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Col15a1O35206 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Col15a1O35206 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.86
Col15a1O35206 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Col15a1O35206 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC26.69■■□□□ 1.86
Col15a1O35206 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 AC099934.2-201ENSMUST00000196389 70 ntBASIC26.68■■□□□ 1.86
Col15a1O35206 AC156953.1-201ENSMUST00000196953 70 ntBASIC26.68■■□□□ 1.86
Col15a1O35206 AC157822.2-201ENSMUST00000200291 70 ntBASIC26.68■■□□□ 1.86
Col15a1O35206 Gm42569-201ENSMUST00000200539 472 ntBASIC26.68■■□□□ 1.86
Col15a1O35206 Gm42642-201ENSMUST00000200683 355 ntBASIC26.68■■□□□ 1.86
Col15a1O35206 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Col15a1O35206 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col15a1O35206 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Col15a1O35206 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Col15a1O35206 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col15a1O35206 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC26.67■■□□□ 1.86
Col15a1O35206 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Col15a1O35206 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC26.66■■□□□ 1.86
Col15a1O35206 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col15a1O35206 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Col15a1O35206 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Col15a1O35206 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC26.66■■□□□ 1.86
Col15a1O35206 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC26.66■■□□□ 1.86
Col15a1O35206 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC26.65■■□□□ 1.86
Col15a1O35206 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col15a1O35206 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Col15a1O35206 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC26.65■■□□□ 1.86
Col15a1O35206 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Col15a1O35206 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Col15a1O35206 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Col15a1O35206 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Col15a1O35206 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col15a1O35206 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC26.63■■□□□ 1.85
Col15a1O35206 AC165080.2-201ENSMUST00000217491 1530 ntBASIC26.63■■□□□ 1.85
Col15a1O35206 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col15a1O35206 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col15a1O35206 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Col15a1O35206 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col15a1O35206 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
Col15a1O35206 Gm37179-201ENSMUST00000194862 823 ntBASIC26.62■■□□□ 1.85
Col15a1O35206 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC26.62■■□□□ 1.85
Col15a1O35206 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col15a1O35206 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Col15a1O35206 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Col15a1O35206 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC26.62■■□□□ 1.85
Col15a1O35206 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Col15a1O35206 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col15a1O35206 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Col15a1O35206 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC26.61■■□□□ 1.85
Col15a1O35206 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col15a1O35206 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col15a1O35206 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Col15a1O35206 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Col15a1O35206 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col15a1O35206 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col15a1O35206 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col15a1O35206 Gm27045-201ENSMUST00000182145 1402 ntBASIC26.6■■□□□ 1.85
Col15a1O35206 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Col15a1O35206 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Col15a1O35206 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col15a1O35206 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Col15a1O35206 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Col15a1O35206 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col15a1O35206 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col15a1O35206 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Col15a1O35206 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Col15a1O35206 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.84
Col15a1O35206 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC26.58■■□□□ 1.84
Col15a1O35206 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC26.57■■□□□ 1.84
Col15a1O35206 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col15a1O35206 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col15a1O35206 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Col15a1O35206 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Col15a1O35206 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC26.57■■□□□ 1.84
Col15a1O35206 Gm10033-202ENSMUST00000211874 928 ntBASIC26.57■■□□□ 1.84
Col15a1O35206 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col15a1O35206 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col15a1O35206 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col15a1O35206 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Col15a1O35206 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Col15a1O35206 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms