Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.4■□□□□ 0.22
Ndufb11O09111 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ndufb11O09111 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ndufb11O09111 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ndufb11O09111 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Ndufb11O09111 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ndufb11O09111 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ndufb11O09111 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ndufb11O09111 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ndufb11O09111 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ndufb11O09111 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ndufb11O09111 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Ndufb11O09111 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ndufb11O09111 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Gm5784-201ENSMUST00000179344 2478 ntBASIC16.36■□□□□ 0.21
Ndufb11O09111 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ndufb11O09111 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ndufb11O09111 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ndufb11O09111 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ndufb11O09111 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC16.35■□□□□ 0.21
Ndufb11O09111 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Ndufb11O09111 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ndufb11O09111 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Ndufb11O09111 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ndufb11O09111 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ndufb11O09111 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.34■□□□□ 0.21
Ndufb11O09111 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ndufb11O09111 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ndufb11O09111 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ndufb11O09111 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.21
Ndufb11O09111 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ndufb11O09111 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ndufb11O09111 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ndufb11O09111 Rarb-207ENSMUST00000225921 2756 ntBASIC16.32■□□□□ 0.2
Ndufb11O09111 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndufb11O09111 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndufb11O09111 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ndufb11O09111 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms