Protein–RNA interactions for Protein: O08785

Clock, Circadian locomoter output cycles protein kaput, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClockO08785 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ClockO08785 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ClockO08785 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ClockO08785 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ClockO08785 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ClockO08785 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ClockO08785 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.33■□□□□ 0.68
ClockO08785 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ClockO08785 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClockO08785 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClockO08785 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ClockO08785 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.32■□□□□ 0.68
ClockO08785 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.32■□□□□ 0.68
ClockO08785 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
ClockO08785 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.32■□□□□ 0.68
ClockO08785 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ClockO08785 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ClockO08785 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ClockO08785 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.3■□□□□ 0.68
ClockO08785 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ClockO08785 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Gm9806-201ENSMUST00000051080 552 ntBASIC19.3■□□□□ 0.68
ClockO08785 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ClockO08785 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ClockO08785 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ClockO08785 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClockO08785 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ClockO08785 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ClockO08785 Scarna2-201ENSMUST00000157560 414 ntBASIC19.29■□□□□ 0.68
ClockO08785 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClockO08785 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ClockO08785 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.29■□□□□ 0.68
ClockO08785 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.28■□□□□ 0.68
ClockO08785 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ClockO08785 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
ClockO08785 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClockO08785 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ClockO08785 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ClockO08785 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ClockO08785 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ClockO08785 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ClockO08785 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ClockO08785 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
ClockO08785 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ClockO08785 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.26■□□□□ 0.67
ClockO08785 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.26■□□□□ 0.67
ClockO08785 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ClockO08785 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.25■□□□□ 0.67
ClockO08785 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.25■□□□□ 0.67
ClockO08785 Gm16437-201ENSMUST00000025669 507 ntBASIC19.25■□□□□ 0.67
ClockO08785 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ClockO08785 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClockO08785 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ClockO08785 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.24■□□□□ 0.67
ClockO08785 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClockO08785 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClockO08785 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ClockO08785 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 118.7 ms