Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sema3aO08665 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sema3aO08665 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.67■□□□□ 0.9
Sema3aO08665 Gm9870-201ENSMUST00000063874 645 ntBASIC20.67■□□□□ 0.9
Sema3aO08665 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sema3aO08665 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sema3aO08665 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sema3aO08665 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sema3aO08665 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.66■□□□□ 0.9
Sema3aO08665 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Sema3aO08665 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sema3aO08665 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sema3aO08665 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.66■□□□□ 0.9
Sema3aO08665 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3aO08665 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3aO08665 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3aO08665 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.65■□□□□ 0.9
Sema3aO08665 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3aO08665 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sema3aO08665 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sema3aO08665 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema3aO08665 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sema3aO08665 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3aO08665 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.64■□□□□ 0.89
Sema3aO08665 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.64■□□□□ 0.89
Sema3aO08665 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3aO08665 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3aO08665 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3aO08665 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sema3aO08665 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3aO08665 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3aO08665 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3aO08665 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.63■□□□□ 0.89
Sema3aO08665 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.63■□□□□ 0.89
Sema3aO08665 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3aO08665 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.63■□□□□ 0.89
Sema3aO08665 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sema3aO08665 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Sema3aO08665 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Sema3aO08665 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.62■□□□□ 0.89
Sema3aO08665 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sema3aO08665 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.61■□□□□ 0.89
Sema3aO08665 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.61■□□□□ 0.89
Sema3aO08665 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sema3aO08665 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sema3aO08665 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sema3aO08665 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3aO08665 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.6■□□□□ 0.89
Sema3aO08665 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3aO08665 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sema3aO08665 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.59■□□□□ 0.89
Sema3aO08665 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.59■□□□□ 0.89
Sema3aO08665 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sema3aO08665 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Sema3aO08665 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sema3aO08665 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sema3aO08665 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3aO08665 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3aO08665 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sema3aO08665 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sema3aO08665 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Sema3aO08665 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.58■□□□□ 0.89
Sema3aO08665 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.58■□□□□ 0.89
Sema3aO08665 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Sema3aO08665 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Sema3aO08665 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.57■□□□□ 0.88
Sema3aO08665 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sema3aO08665 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sema3aO08665 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Sema3aO08665 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.56■□□□□ 0.88
Sema3aO08665 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sema3aO08665 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.56■□□□□ 0.88
Sema3aO08665 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.56■□□□□ 0.88
Sema3aO08665 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms