Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sh3yl1O08641 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.41■□□□□ 0.7
Sh3yl1O08641 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sh3yl1O08641 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.4■□□□□ 0.7
Sh3yl1O08641 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sh3yl1O08641 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3yl1O08641 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.39■□□□□ 0.69
Sh3yl1O08641 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sh3yl1O08641 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sh3yl1O08641 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.37■□□□□ 0.69
Sh3yl1O08641 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.37■□□□□ 0.69
Sh3yl1O08641 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sh3yl1O08641 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Gm22238-201ENSMUST00000175222 88 ntBASIC19.36■□□□□ 0.69
Sh3yl1O08641 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sh3yl1O08641 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sh3yl1O08641 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.35■□□□□ 0.69
Sh3yl1O08641 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sh3yl1O08641 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.35■□□□□ 0.69
Sh3yl1O08641 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.34■□□□□ 0.69
Sh3yl1O08641 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.34■□□□□ 0.69
Sh3yl1O08641 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sh3yl1O08641 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3yl1O08641 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sh3yl1O08641 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sh3yl1O08641 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3yl1O08641 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.33■□□□□ 0.68
Sh3yl1O08641 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3yl1O08641 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sh3yl1O08641 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sh3yl1O08641 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Sh3yl1O08641 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sh3yl1O08641 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms