Protein–RNA interactions for Protein: O08604

Raet1c, Retinoic acid early-inducible protein 1-gamma, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1cO08604 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.23■□□□□ 0.51
Raet1cO08604 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.23■□□□□ 0.51
Raet1cO08604 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.23■□□□□ 0.51
Raet1cO08604 Gm40881-201ENSMUST00000223397 166 ntBASIC18.23■□□□□ 0.51
Raet1cO08604 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.23■□□□□ 0.51
Raet1cO08604 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.23■□□□□ 0.51
Raet1cO08604 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Raet1cO08604 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Raet1cO08604 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Raet1cO08604 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Raet1cO08604 Gm15546-201ENSMUST00000122095 826 ntBASIC18.22■□□□□ 0.51
Raet1cO08604 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.22■□□□□ 0.51
Raet1cO08604 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.22■□□□□ 0.51
Raet1cO08604 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1cO08604 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Raet1cO08604 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.22■□□□□ 0.51
Raet1cO08604 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1cO08604 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
Raet1cO08604 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1cO08604 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Raet1cO08604 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1cO08604 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Raet1cO08604 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1cO08604 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Raet1cO08604 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.2■□□□□ 0.5
Raet1cO08604 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1cO08604 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.2■□□□□ 0.5
Raet1cO08604 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.2■□□□□ 0.5
Raet1cO08604 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Raet1cO08604 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1cO08604 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Raet1cO08604 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1cO08604 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1cO08604 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Raet1cO08604 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1cO08604 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.19■□□□□ 0.5
Raet1cO08604 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1cO08604 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1cO08604 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.19■□□□□ 0.5
Raet1cO08604 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Raet1cO08604 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Raet1cO08604 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1cO08604 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1cO08604 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1cO08604 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Raet1cO08604 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Raet1cO08604 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1cO08604 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.17■□□□□ 0.5
Raet1cO08604 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.17■□□□□ 0.5
Raet1cO08604 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Raet1cO08604 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
Raet1cO08604 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Raet1cO08604 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.16■□□□□ 0.5
Raet1cO08604 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Raet1cO08604 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.15■□□□□ 0.5
Raet1cO08604 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.15■□□□□ 0.5
Raet1cO08604 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.15■□□□□ 0.5
Raet1cO08604 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Raet1cO08604 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.15■□□□□ 0.5
Raet1cO08604 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Raet1cO08604 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.15■□□□□ 0.5
Raet1cO08604 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Raet1cO08604 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Raet1cO08604 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Raet1cO08604 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1cO08604 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.14■□□□□ 0.49
Raet1cO08604 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1cO08604 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Raet1cO08604 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms