Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
AlyrefO08583 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AlyrefO08583 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.7■□□□□ 0.9
AlyrefO08583 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AlyrefO08583 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
AlyrefO08583 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.7■□□□□ 0.9
AlyrefO08583 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.69■□□□□ 0.9
AlyrefO08583 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.69■□□□□ 0.9
AlyrefO08583 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.69■□□□□ 0.9
AlyrefO08583 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AlyrefO08583 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.68■□□□□ 0.9
AlyrefO08583 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AlyrefO08583 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
AlyrefO08583 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.67■□□□□ 0.9
AlyrefO08583 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
AlyrefO08583 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AlyrefO08583 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.66■□□□□ 0.9
AlyrefO08583 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.66■□□□□ 0.9
AlyrefO08583 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
AlyrefO08583 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AlyrefO08583 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
AlyrefO08583 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AlyrefO08583 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
AlyrefO08583 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AlyrefO08583 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AlyrefO08583 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.65■□□□□ 0.9
AlyrefO08583 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
AlyrefO08583 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
AlyrefO08583 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
AlyrefO08583 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AlyrefO08583 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
AlyrefO08583 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
AlyrefO08583 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AlyrefO08583 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC20.64■□□□□ 0.89
AlyrefO08583 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC20.64■□□□□ 0.89
AlyrefO08583 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.64■□□□□ 0.89
AlyrefO08583 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AlyrefO08583 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AlyrefO08583 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
AlyrefO08583 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.63■□□□□ 0.89
AlyrefO08583 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
AlyrefO08583 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
AlyrefO08583 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.63■□□□□ 0.89
AlyrefO08583 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.63■□□□□ 0.89
AlyrefO08583 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AlyrefO08583 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
AlyrefO08583 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AlyrefO08583 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.62■□□□□ 0.89
AlyrefO08583 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AlyrefO08583 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC20.62■□□□□ 0.89
AlyrefO08583 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AlyrefO08583 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
AlyrefO08583 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.62■□□□□ 0.89
AlyrefO08583 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.62■□□□□ 0.89
AlyrefO08583 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
AlyrefO08583 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
AlyrefO08583 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.62■□□□□ 0.89
AlyrefO08583 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
AlyrefO08583 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
AlyrefO08583 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AlyrefO08583 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AlyrefO08583 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AlyrefO08583 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
AlyrefO08583 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.61■□□□□ 0.89
AlyrefO08583 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.61■□□□□ 0.89
AlyrefO08583 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
AlyrefO08583 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
AlyrefO08583 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.6■□□□□ 0.89
AlyrefO08583 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AlyrefO08583 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.59■□□□□ 0.89
AlyrefO08583 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.59■□□□□ 0.89
AlyrefO08583 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AlyrefO08583 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AlyrefO08583 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms