Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gm21788J3QNH3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gm21788J3QNH3 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.24■□□□□ 0.35
Gm21788J3QNH3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Gm13238-201ENSMUST00000117655 780 ntBASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Gm10399-202ENSMUST00000202768 748 ntBASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm21788J3QNH3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.23■□□□□ 0.35
Gm21788J3QNH3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm21788J3QNH3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm21788J3QNH3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Gm10232-201ENSMUST00000089221 720 ntBASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm21788J3QNH3 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Gm21788J3QNH3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Gm21788J3QNH3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms